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Accession Number |
TCMCG057C14631 |
gbkey |
CDS |
Protein Id |
XP_018475970.1 |
Location |
complement(join(28726835..28726906,28727004..28727072,28727151..28727228,28727318..28727384,28727471..28727575,28727672..28728192,28728276..28728451,28728628..28729250,28729421..28729989,28730101..28730286,28730406..28731107,28731191..28731434,28731666..28731806,28731897..28732873,28733001..28734113,28734200..28734238)) |
Gene |
LOC108847268 |
GeneID |
108847268 |
Organism |
Raphanus sativus |
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Length |
1893aa |
Molecule type |
protein |
Topology |
linear |
Data_file_division |
PLN |
dblink |
BioProject:PRJNA344915 |
db_source |
XM_018620468.1
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Definition |
PREDICTED: E3 ubiquitin-protein ligase PRT6-like isoform X1 [Raphanus sativus] |
CDS: ATGGAGACCAACTCGCGTGCACATGATTTTCTCCTCAAGAGGCTTGCTTCTATTGGGGTCCCTAAGAAATGCTGTTCCAAACGTGGCCTAGTGGAATTCGTTAGAGCTAACCGATCCAGGATCTCGGAGCTCGTCTCTGCTCTCTTACCTACCGATGAGGATGTTAAAGCTGTACTGAAGGGAACTAAGGAACAGCCTCACAAGTCTGCGGTGAGTCCCACCATGAAAAAGAGGTTCAGGGAGAGCATGAGTTGGCTGCAGTGGCTCATGTTCCAGGACGAGCCTCGTGTTTCCTTGAAGAATCTTGCGAAATCGAATGTTGATCAGCAGCGAGGTGTCTGTGGCTCCGTCTGGGGAGAACATGATATAGCGTATCGGTGCAGAACGTGCGAGAATGACTCGAGTTGTGCGATCTGCGTGTCTTGTTTCGAGAATGGTGATCACAGCTCCCACGATTATTCCATCATGTACACCAACGGTGGTTGTTGTGATTGTGGGGATGATACAGCCTGGAAAAAAGATGGTTTCTGTTCGAATCATAAAGGTTCCGAGCAGATTCAACCCCTCTCAGAGACTCTAGCAGAGTCGGTTGGGCCTGTACTTGATGCTCTTTTTACTTGTTGGAATAGCAGGCTCGTATCTGCAGAGAGTGTTTGTGAGAACGATGCGAGATCCAACGATACTCTTGCTGTACACCAAAAGATGTCAAACGAGCTGACATTCGTAGTGGTTGAAATGCTTCTGGGGTTTTATAAGTCTAGTGAGAGTCTGCTAAGTTTTGTTTCTAGAAGGATGGTCGCTTCAAGTGGTCTATTGATGATTCTCGTAAAGGCTGAGGGGTTCTTGGACAAAGATGTTATGGAGAAACTACACGACTTGCTCCTCAAATTGATAGGAGATCCCGTCTTTAAGTCGGAATTTGCGAAAGCGCTTGTGAGTTACTATCCACTTGGCATTAGTGAAGCGGTTAAGAATGGTCATGATCATGCATTCATGCAATATCCTCCACTGATGTCTTTGTTTTCTGTGCAATTCTTCACGGTGCCGACTCTAACAGCATTTCTGGTGAAGGAAATGAATCTGCTAGCAATGCTTTTGGGATGCCTCAATGATATCTTTCTTTCTTGTTGTGGGGAGGATGGTGTGCTACAGGTTACAAAGTGGGAAGAGTTGTATGAGACAGGTGAGCGTGTCATTCGAGACTTGAAATATGTTACGTGCCATCCTGTAGTTTCTAAGTACGCAACAAATGAAGATCGGGAGTTATCAAGATCATGGTTGGTACTCTTGACCTTTGCTCAAGGAATGGATCCTCTGAAAAGAGAGACTGGAATCCATATTGAAGAAGAAAATGAGAGCGCGCATATGTTCTTTGAGTTGAGTCATTCAATAGCTGCTATTCACTTTCTGTTGGTTAACGGTACATACTCTCCTGCCAGTGATGAACAAATAGAAAATGAGAGAACCACCAAGGCTAGACTAGATAATTGTGATGGAGATGGAGAAAGGCATGCAAAAGTTGGGAGATTGTCTCATGAAGATTCCGTATGTACCGCGATGATAAAGAGCAGATCCTTTGATAGCTCGATGGCTTCTGAAGTCCACGAAATTGACGCTCTCCATGCCCTGATTCCTTCTTCTGCCATATGGTTGATACGCGAGTGTTTGAACGTTCTGGAGACATGCTTAGGAAATGATGAAGGTATATCAAAATTTATGTGCAAGTTTGTGTCTCCTAGCGGCAACTCTTCCGATCCGACGAAAAATGCATCAGGAGTACATATGTTTGGTCTGTGTGATTGGCCGGACATCCACTACGATGTGAGCCTTCAGGCCATATCAATCCATCTACCGTTACACCGGTTACTTTCTTTGCTCATAGAAAAAGCATTAAGGTTGTGTTATGGAGAATCTGCCTTGCACCATGGAGTCAGTGTTAGTCTTGAGATCCCACAGGCGGACTTCTTCAGCTATGTGTTCGGAGATTTCCATCCTTGTGGCTTTTCTGCACTTGTTATGGAGCATGTTCTCCGGGTAAGGGTGTTCTGTGCCCAAGTTATTGCTGGAATGTGGAAGAAGAATGGGGATCCTCCATTAGTATCTTGTGAGTGGTATAGGTCAGTTCGTTGGTCAGAACAGGGACTTGAGCTTGATCTATTTCTCTTGCAGTGTTGTGGTGCGTTGGCTCCTGCTGATTCTTATGTTAATAAGCTTCTCAGTCGATTTGGGCTCTCGAGCTATCTTTCACAAAGCCCTGATAGAACAAATGAGTATGAACCAGTTTTGGTCCAGGAAATGCTTGCTCTTTTGATACAGATTCTGCAAGAAAGGCGTTTTTGTGGTCTTTCTACTGCTGAAAGTTTGAGAAGAGAGATCATCTGCAAGTTGGCTACTGGAGATTTCACTCGTAGTAAATTGGTCAAATCTTTACCCCGTGATCTCTCCAAGTCGGATGAGCTCCAAGAGGTCTTAGATAACGTTTCAGTCTATTGTAATCCATCCGGCATGAACCAGGGAAAGTATTCACTACGGCCATCTTGTTGGAAGGAATTGGATCTCTATCACCCTCGTTGGCATTCAAGAGAATTGCAATCTGCAGAAGAAAGGTTTTCGCGCTATTGTGGAGTGTCTGCCTTGTCAACTCAGCTTCCTAGGTGGCGAATGATCTATCCGCCTCTAAATGGGCTTTCGAGAATAGGAACTTGCAAAACCACTTTTCAAATCATTTCCTCTGCTTTATACTACGCACTACAGAGTGGTACCTCTGTTAAATCACGTGCTCCAGATGGCGTTCTCATAACCGCTTTGCACTTACTCTCGCTATCATTGGATATTTGCTCTCAGCAAAGGGAATCTAATACTCAGGCTTGCTGCGTAGAAGATTCAATTCCGCTTCTCGAATTAGCTGGTCTGGAATTAATGGGTATAAATCAAGGGACTGGAAGAGAAAGTTTGTTGTCTCTTCTTGTCTCATTAATGAGGACTCGTAAAGACGATGGTCTCCGTCAATTTCCAGAGGCAGGTAGTTGCAATATTTCGTCCTGGATTGGAGAATTGCTGAAGAAGTTCAGTGCAATTGATTCTGTCTGTATGAACCTATTGCAAAGTCTTGCCCCGGAGGTGGTTGGTCAATCTGGATTTGATAAAGTCACATCAGGCTCTACTTCTGATGAGAAACGCAAGGCTAAAGCTAGAGAGAGGCAGGCTGCTATTCTGGCAAAAATGAAAGCTGAACAAACAAAATTCTTGTCCAGCATGGATGATGATGATCCGAGATCTGAAACTGAAACAACAAGTGATTCCGTAATGGAACAGGATTCAGAAATTGCTGTTCGTGAAGTTTGCTCTCTCTGCCATGACCCAGATTCCAAAGACCCGGTTTCTTACTTGATTTTTCTCCAGAAATCTAAAATCTTGAGTTTTGTGGATAGAGGCCCTCCATCTTGGGATCAAGGTCCACAGTCAGAAAAGAATATGTCTGTTGATGGAGTTGGCGATGTCCTGAGAAGTAATGTCTCCTCAGATAGTTCAATGATTCCTCATGATGCAACCTCTGAGCCTGCTACAGATTCCGTGTTTGAAGCTTTAACAACCCGGCTTATAAGGAATAGTCAGAGGGAGAAGAGGTCTAGTGATGGGAGGGGAAAAGATGAATCTAACATGGAATCAATGGAGATAGCTATGTATCAAACCGTTCGCAGGAAAATTGATAACATTACAAATCAAAGCCTTACACATGTAGATCAACGACCGCATGCTGCTGAGAGTATTTCGGAGAGAAATCGTGTTACTGGTCTATCTACTTTGCAAGTTAGAGTTCCTGATACTCGATCAAGACAAACCTCCAGACATTCGGATGTCGGTTCAGATGGGTTTCACCCTACTGACTGTGATGGTGTTTATCTTTCATCATGTGGACATGCTGTGCATCAAAGCTGTCTTGAACGATATTTAAAGTCGTTAAGGGAGAGCTCTGGGGAATTTCTCTGTCCTGCATGCCGGGGACTAGCTAATTCTGTATTGCCTGCATGTCCCCGAGATTTATGTTCTGTCTCAAGGAAACAGGAAAGTTCGCATGCCAAGTTAGGTAAATCAAATGCACAGATGCCTTCGCTTTGGCTCTCTGAAGCGTTGTGTCTGCTACGATCTGCGGCTGACGTGATCGAAGACGGTGATAGCGTTAGAACAGTTTCTCTGCAGGGAGCCGAACCAAGAAGGAAAGATCTTGAATCTGTCTCTAACAAGCTCTGGAATTTCTATTTTTCTAAGCGACAGGGAAAATTTCCGGGAAGTCATTGGGTATCACAATCAATCGTTATGTGGGACACCCTTAAGTACTCACTTATTTCAATGGAAATTAATACTCGCCGTGCGAAGAGTTCAATGCTTCCTGTGTATTGTGTTGACTCCTTGTATGAAGAGTTAAATACCTCCAAGGGAACTGCTTTGTCACTCTTATTACGAGTGGTACAGAGCACCCGAACAAAGAATGCTTTACATGTCTGTCAGAGATTTATGGGCATGAAGCATCTGGCAGAGTCTATATGCTTTGGAATTTCAAGTTCTCCTTCGAGCAGCATTTTTGGAAGCGAAGCAGGTTCACTGAAGAATATAAACCTGCTCTGGAATCGAGCATCTGATCCAGTTCTTTCCCATGACCCATTTTCATCACTGATGTGGGCTCTTTTTTGTCTCCCTTCTCCTTTCATCACATGCAAGGAATCTCTATTATCGCTTGTGCATATCTTCTACGGTGTGTCTCTTGTTCAGACTGTAATCGCCTATTGCGCAGGTCGCATGTTTGACTTGAGTAAATTAGAATTCGAGGAAAACCTGCTTAGCGACATCCCCACCGTTTTGAGAGAATCAGGTGGTTGGGAGTATTTCAGGTCTAACAATATGGATTTATCATGTGAGTTAAAAGAGACTATCCGTAGCTATAGTCTTCCTTTCTTGAGGAGATGTGCATTGCTGTGGAGGCTACTGAAAACTACTTCTGGGAAGTGTCATGAAAAGGAAGATATGTTTGATGTGCCGTCTGACTCCACCAGCGACAACATGCATTCCCAGTCGGAGCTGAATCATGTGAATGAATTGGAGAAAATGTTCAAGATCCCGCCTATTGATATCATTGTCAATGATGAACTTCTCCGGTCATCAACACAAACATGGCTTCGACATTTCCAGAAGGAATACAAAGCTAACAGAGTTAAAAGGCCTTTCTGCATAACACCTGTAGTTCCTTTCCAGCTTATGAAGTTACCCAATTTATACCAGGACCTATTGCGAAGGTATATCAAGAAACCTTGTAGCAACTGCAAGAAAGTTATGATAGATCCTGCATTGTGTCTTCTTTGCGGAAGATTGTGTTCTCCCATAATGCTGCCTTGTTGCAGTGAAAGTGATTGCCAGACTCATGCAGTCACCTGTTGTGCTGGTACTGGTGTATTTCTTCTGCTACGGGGGACCACGATTTGGCTACAAAGATTTGGAAGTCAATCATCTTGGTCATCTCTTTACTTGGATACGTTTGGAGAAGAGGATACCAATCTGTTAAGAGGAAAACCACTATACCTGAATGAAGAACGTTACGCTGCATTAACATACATGGTTGGTTCTCATGGACTCGATCACAGCTCCGAAGTTCTCAATCAAACCACCATCGAGACTTTCGTCATTTAA 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Protein: METNSRAHDFLLKRLASIGVPKKCCSKRGLVEFVRANRSRISELVSALLPTDEDVKAVLKGTKEQPHKSAVSPTMKKRFRESMSWLQWLMFQDEPRVSLKNLAKSNVDQQRGVCGSVWGEHDIAYRCRTCENDSSCAICVSCFENGDHSSHDYSIMYTNGGCCDCGDDTAWKKDGFCSNHKGSEQIQPLSETLAESVGPVLDALFTCWNSRLVSAESVCENDARSNDTLAVHQKMSNELTFVVVEMLLGFYKSSESLLSFVSRRMVASSGLLMILVKAEGFLDKDVMEKLHDLLLKLIGDPVFKSEFAKALVSYYPLGISEAVKNGHDHAFMQYPPLMSLFSVQFFTVPTLTAFLVKEMNLLAMLLGCLNDIFLSCCGEDGVLQVTKWEELYETGERVIRDLKYVTCHPVVSKYATNEDRELSRSWLVLLTFAQGMDPLKRETGIHIEEENESAHMFFELSHSIAAIHFLLVNGTYSPASDEQIENERTTKARLDNCDGDGERHAKVGRLSHEDSVCTAMIKSRSFDSSMASEVHEIDALHALIPSSAIWLIRECLNVLETCLGNDEGISKFMCKFVSPSGNSSDPTKNASGVHMFGLCDWPDIHYDVSLQAISIHLPLHRLLSLLIEKALRLCYGESALHHGVSVSLEIPQADFFSYVFGDFHPCGFSALVMEHVLRVRVFCAQVIAGMWKKNGDPPLVSCEWYRSVRWSEQGLELDLFLLQCCGALAPADSYVNKLLSRFGLSSYLSQSPDRTNEYEPVLVQEMLALLIQILQERRFCGLSTAESLRREIICKLATGDFTRSKLVKSLPRDLSKSDELQEVLDNVSVYCNPSGMNQGKYSLRPSCWKELDLYHPRWHSRELQSAEERFSRYCGVSALSTQLPRWRMIYPPLNGLSRIGTCKTTFQIISSALYYALQSGTSVKSRAPDGVLITALHLLSLSLDICSQQRESNTQACCVEDSIPLLELAGLELMGINQGTGRESLLSLLVSLMRTRKDDGLRQFPEAGSCNISSWIGELLKKFSAIDSVCMNLLQSLAPEVVGQSGFDKVTSGSTSDEKRKAKARERQAAILAKMKAEQTKFLSSMDDDDPRSETETTSDSVMEQDSEIAVREVCSLCHDPDSKDPVSYLIFLQKSKILSFVDRGPPSWDQGPQSEKNMSVDGVGDVLRSNVSSDSSMIPHDATSEPATDSVFEALTTRLIRNSQREKRSSDGRGKDESNMESMEIAMYQTVRRKIDNITNQSLTHVDQRPHAAESISERNRVTGLSTLQVRVPDTRSRQTSRHSDVGSDGFHPTDCDGVYLSSCGHAVHQSCLERYLKSLRESSGEFLCPACRGLANSVLPACPRDLCSVSRKQESSHAKLGKSNAQMPSLWLSEALCLLRSAADVIEDGDSVRTVSLQGAEPRRKDLESVSNKLWNFYFSKRQGKFPGSHWVSQSIVMWDTLKYSLISMEINTRRAKSSMLPVYCVDSLYEELNTSKGTALSLLLRVVQSTRTKNALHVCQRFMGMKHLAESICFGISSSPSSSIFGSEAGSLKNINLLWNRASDPVLSHDPFSSLMWALFCLPSPFITCKESLLSLVHIFYGVSLVQTVIAYCAGRMFDLSKLEFEENLLSDIPTVLRESGGWEYFRSNNMDLSCELKETIRSYSLPFLRRCALLWRLLKTTSGKCHEKEDMFDVPSDSTSDNMHSQSELNHVNELEKMFKIPPIDIIVNDELLRSSTQTWLRHFQKEYKANRVKRPFCITPVVPFQLMKLPNLYQDLLRRYIKKPCSNCKKVMIDPALCLLCGRLCSPIMLPCCSESDCQTHAVTCCAGTGVFLLLRGTTIWLQRFGSQSSWSSLYLDTFGEEDTNLLRGKPLYLNEERYAALTYMVGSHGLDHSSEVLNQTTIETFVI |